Alignment |
|
|
|
| Geneious 5.6.5 |
genome & proteome research tools |
| MACAW
2.05 |
Multiple Alignment Construction & Analysis Workbench |
| Clustal
W 2.1 |
multiple alignment program for DNA or proteins. |
| FASTA
36.3.5d |
Compares a protein sequence to another protein sequence or to a protein database, or a DNA sequence to another DNA sequence or a DNA library. |
| GeneDoc 2.7.0 |
A Full Featured Multiple Sequence Alignment Editor, Analyser and Shading Utility for Windows. |
|
BLAST
2.2.26 |
The Basic Local Alignment Search Tool |
| SeqPup
0.9 |
a biological sequence editor and analysis program |
| K-Estimator 6.1v |
a program to estimate the number of synonymous (Ks) and nonsynonymous substitutions (Ka) per site and the confidence intervals by Monte Carlo simulations. |
| BioEdit 7.1.3 |
a biological sequence alignment editor written for Windows 95/98/NT/2000/XP. |
| DAMBE 5.3.00 |
Data Analysis and Molecular Biology and Evolution software |
| SeaView 4.4.0 |
a graphical multiple sequence alignment editor |
| Jalview 2.7 |
a multiple alignment editor written entirely in java |
| DNASIS
Max trial 3.0 |
Bioinformatics software |
| Genamics
Expression 1.1 |
a revolutionary new Windows application for DNA and protein sequence analysis. |
| Vector
NTI Viewer 4.0.1 |
a freeware program, allows scientists to study and analyze biological molecules. |
| Jellyfish
3.3.1 |
an innovative software tool that provides helpful gene analysis capabilities in an intuitive and easy-to-use interface. |
| ProSeq
3.2 |
program for sequence editing and population genetics (mol/evol) analysis. |
| SMS 2 |
The Sequence Manipulation Suite |
| Staden
2.0.0b9 |
A fully developed set of DNA sequence assembly (Gap4), editing and analysis tools |
| ISYS
v1.35 |
a dynamic, flexible open source platform for the integration of bioinformatics software tools and databases. |
| PhyloGrapher2003.4.3 |
a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements) |
|
Vector NTI Advance 11.5.2 Demo |
Sequence analysis and data management software |
| SeWeR
3.0 |
an acronym, stands for SEquence analysis using WEb Resources. |
| WinBlast
v.0.2.0 |
a Windows graphical front-end for NCBI BLAST. |
| SeqVISTA
1.81 |
A Graphical Tool for Sequence Feature Visualization and Comparison |
| GENOME
EXPLORER 1.0b |
a Java front end to many useful bioinformatics tools |
| PowerBlast 1.2.0 |
Blast local tools |
| JAligner 1.0 |
local pairwise sequence alignment software |
| DNAMAN 7.0 Demo |
sequence analysis tools |
| CLC Sequence Viewer 6.7.1 |
bioinformatics analyses workbench. |
| MAFFT 6.935 |
a multiple sequence alignment program. |
| Exonerate 2.2 |
a multiple sequence alignment program. |
| Lalnview 3.0 |
graphical program for visualizing local alignments between two sequences |
| NeoBio 1.0 pre-alpha |
Bioinformatics Algorithms in Java |
| STRAP 20111124 |
Multiple Sequence Alignment Interactive Program |
| Mauve 2.3.1 |
Genome Alignment Software |
| Laj 070222 |
tool for viewing and manipulating the output from pairwise alignment programs |
| YASS v1.14 |
DNA local alignment tool |
| Utopia 1.4.5 |
Molecular Structure Viewer and Colour INteractive Editor for Multiple Alignments |
| MolQuest trial 2.4.2 |
Bioinformatics Toolbox for analysis of biomedical data |
| GENtle 1.9.4 |
a software for DNA and amino acid editing |
| Align-m v2.3 |
multiple alignment software |
| QAlign 2.60.80 |
Multiple alignment and editor software. |
| seqtools v. 8.4.066 |
tools for basic and advanced analyses of nucleotide and protein sequences. |
| BlastViewer 2.4 |
software to explore BLAST results graphically |
| CGViz 1.3.5 |
highly flexible framework for designing biomolecular viewers. |
| BioSeqAnalyzer 1.0 demo |
a bioinformatics software tool for analyzing DNA and protein sequences. |
| Topali 2.5 |
statistical and evolutionary analysis of multiple sequence alignments |
| IGV 2.1.25 |
A visualization tool to simultaneously integrate and analyze multiple types of genomic data. |
| EMBOSS 6.5.7 |
The European Molecular Biology Open Software Suite |
| Biskit 2.4.0 |
A Python platform for structural bioinformatics. |
| geWorkbench 2.4.1 |
genomics Workbench , a Java-based open-source platform for integrated genomics. |
| SnS-Align |
Structure and Sequence Alignment Software. |
| UGENE 1.11.3 |
Integrated Bioinformatics Tools. |
| CHROMA1.0 |
A tool for generating annotated multiple sequence alignments. |
| Recco 0.93 |
Recombination Analysis Using Cost Optimization. |
| Phred/Phrap/Consed 23.0 |
DNA Sequence Assembler & Finishing Tools. |
