Bio-chip |
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| ScanAlyze
2.51 |
Process fluorescent images of microarrays |
| TreeView
1.60 |
Graphically browse results of clustering and other analyses from Cluster |
| ArrayMaker 2.6 |
provides high performance robotic control of microarrayer robots |
| J-Express
pro 2012 |
software package for analysis and visualization of microarray data |
| MAExplorer
Version 0.96.34.01 |
Java-based data-mining facility for cDNA or oligonucleiotide microarray databases |
| FreeView & FreeOView |
programs for viewing and optimizing gene expression dendrograms |
| dchip
2010.01 |
DNA-Chip Analyzer (dChip) (www.dchip.org) is a Windows software package for probe-level and high-level analysis of Affymetrix gene expression microarrays and SNP microarrays |
| SAM
4.01 |
Significance Analysis of Microarrays |
| BRB-ArrayTools
4.5.0 b1 |
visualization and statistical analysis of DNA microarray gene expression data |
| AMIADA
2.0.7 |
program for organizing, exploring, visualizing, and analyzing microarray data |
| GalFileGenerator v1.4 |
Conversion of a file of 96 well plates into a file of 384 well plates, and conversion of a file of 384 well plates into an Axon GenePix Gene Array List file |
| cluster
3.0 20141007 |
enhanced version of Cluster |
| GenePattern
3.9.4 |
analytic tools for genomic data |
| GenMAPP-CS 0.2 |
Gene Map Annotator and Pathway Profiler |
| MADAM
v4.1 |
primary data entry, tracking, and reporting system. |
| Spotfinder
v3.2.1 |
multi-channel image analysis tool for microarray images |
| MIDAS
2.22 |
a normalization and filtering tool used to process the raw data output from Spotfinder |
| MeV 4.9 |
main data analysis and visualization tool for microarray |
| Java
Treeview 1.1.6r4 |
Viewer for Microarray Data in the PCL or CDT format |
| EXPANDER
7.0 |
EXpression Analyzer and DisplayER |
| OligoArray
2.1.3 |
a program that computes gene specific oligonucleotides that are free of secondary structure for genome-scale oligonucleotide microarray construction. |
| BAGEL 4.1.1 |
Bayesian Analysis of Gene Expression Levels (BAGEL): a program for the statistical analysis of spotted microarray data. |
| CAGED 1.1 |
a computer program for the analysis of temporal gene expression data. |
| GAAS 1.0.0.1 |
Gene Array Analyzer Software |
| NIA Array Analysis Tool |
Statistical analysis is based on the single-factor ANalysis Of VAriance |
| tools for microarray |
tools for microarray |
| UCSF Spot 2.1 |
a program for microarray image quantification |
| ArrayMiner 5.3 lite |
a set of analysis tools using advanced algorithms to reveal the true structure of your gene expression data |
| Venn Mapper 1.01 |
a program that compares heterologous microarray data sets, based on the number of common, differentially expressed genes. |
| MAIA 2.75 Demo |
Microarray Image Analysis Software , |
| MAGIC Tool 2.1 |
MicroArray Genome Imaging & Clustering Tool. |
| Array Tools 3.3 |
Add-In for Microsoft Excel, which is designed to handle the microarray data. |
| Genom 2005 3.42 |
application for analysing array-experiments. |
| Mayday 2.14 |
A workbench for visualization, analysis and storage of microarray data. |
| ChipInspector 2.1 |
software to analysis microarray data. |
| OligoWiz 2.3.0 |
Microarray Probe Designer. |
| ENIGMA 1.1 |
a software tool to extract gene expression modules from perturbational microarray data |
| PermutMatrix 1.9.3 |
Software for gene expression microarray data analysis. |
| KegArray 1.2.4 |
Java application for microarray data analysis. |
| Correlate 1.03 |
An Excel plug-in that performs sparse canonical correlation analysis. |
| Picky 2.20 demo |
Oligo Microarray Design and Analysis |
| ParaSAM |
An application for significance analysis of microarrays using a parallelized algorithm. |
| VIZARD 1.2 |
A Java program for analysis and visualization of Affymetrix GeneChip? data. |
| COCAS V2.4 |
A ChIP-on-chip analysis suite. |
| ArrayCluster 1.0 |
Mixed Factors Analysis of Microarray Gene Expression Data. |
| GProcesser 3.0 |
– Statistical Analysis of GenePix data. |
