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Recco 0.93

   

Size: 1,573K
Language: English
Directory:Sequence Analysis & Alignmen
Requirements: Java
Date added: 2012-11-08
Web Site: Home Page

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Recco analyzes alignments of sequences that evolved subject to recombination and mutation. The analysis provides evidence as to whether a dataset contains recombination, which sequence is a recombinant and where the recombination breakpoints are. The analysis is based on explaining one sequence with all other sequences in the alignment using mutation and recombination. A parametric analysis of the parameter alpha, which weights recombination cost against mutation cost, yields additional information as to which sequence might be recombinant.

 

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