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3D Molecule

 
RASMOL 2.7.4.2 an excellent and free molecular viewer.
RasTop 2.2 a molecular visualization software adapted from the program RasMol
MolMol 2k.2 molecular graphics program for displaying, analyzing, and manipulating the three-dimensional structure of biological macromolecules
CrystInfo 1.0 Windows application designed for easy visualization. building and examination of crystals.
DS Visualizer 1.7 combines state of the art molecular graphics with a full range of Windows desktop integration tools.
ICM-Browser 3.5 reads PDB files or alignment files directly from the database
VMD 1.8.6 is designed for the visualization and analysis of biological systems such as proteins, nucleic acids, lipid bilayer assemblies, etc.
CN3D 4.1 a helper application for your web browser that allows you to view 3-dimensional structures from NCBI's Entrez retrieval service.
WPDB 2.2 interrogate the 3-dimensional structure of biological macromolecules as found in the Protein Data Bank (PDB) using query and display tools
DTMM 4.2 Demo Desktop Molecular Modeller ( DTMM ) is a simple-to-use molecular modelling program .
gopenmol 3.0 a tool for the visualization and analysis of molecular structures and their chemical properties.
POV-Ray 3.7b23 creates three-dimensional, photo-realistic images using a rendering technique called ray-tracing.
MegaPov 1.2.1 a custom unofficial version of POV-Ray with a lot of additional features.
Mol2Mol 5.6.0 Demo molecular modelling program.
MolPOV 2.0.8 graphics file converter that reads Brookhaven Protein Data Bank format files and produces a ready-to-render input file for the Persistence of Vision ray tracer (POV-Ray).
PovChem 2.1.1 a chemical visualization and illustration program with a new graphic interface.
Ortep-3 1.08 a MS-Windows version of the current release of ORTEP-III (1.0.3).

PWT(PLATON for Windows Taskbar) 1.12

a versatile crystallographic tool implementing a large variety of standard geometrical calculations
Mage 6.44 a 3D vector display program which shows "kinemage" graphics.
Prekin 6.42 prepares molecular kinemages (input files for Mage & KiNG) from PDB-format coordinate files
KiNG 2.13 an interactive system for three-dimensional vector graphics.
Swiss-PdbViewer 3.7 sp5 an application that provides a user friendly interface allowing to analyze several proteins at the same time
StrukEd Demo an editor for molecules that allows the input of chemical structures in a very comfortable way.
JMVC 4 041122 Java3D Molecular Visualisation System
Re_View 1.0 a molecular viewer, animator, analyzer, and MOPAC reaction path
converter.
Oscail X 2007 Ver 2 an integrated high quality system for building and modelling molecules (Mopac and Iconc are included) and the system drives PC GAMESS and Tinker.
Moilin X 2007 will work in stand alone mode or under Oscail and will use Tinker Files if Tinker has been installed
Tinker 4.2 molecular modeling software
Biodesigner 0.75 molecular modeling and visualization program
MoluCAD Demo full-featured molecular modeling and visualization tool designed for Windows.
DS Visualizer ActiveX Control 1.7 a fully Windows integrated, 3D molecular renderer.
ACD/3D Viewer for ISIS 4.5 Convert two-dimensional structures from ACD/ChemSketch into their three-dimensional
PyMOL 0.99rc6 molecular visualization system on an OPEN-SOURCE foundation.
Qmol 3.01 a program for viewing molecular structures and animating molecular trajectories.

Protein Explorer 2.80

free software for visualizing the three-dimensional structures of protein, DNA, and RNA macromolecules
WinMGM 2.0b Visualisation and manipulation tools for biomolecules (proteins and nucleic acids) and organic molecules.
Chimera 1.2470 a highly extensible, interactive molecular graphics program.
Jmol 11.2.14 a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry.
Ramachandran Plot Explorer 1.0 It has been specially designed to focus solely on the ?, ^ and ? angles.
ProteinScope LE 1.0.5 A single, integrated application for your desktop * Hand optimized 3D for complex molecules
CHIME 2.6 SP7 view chemical structures from within popular Web browsers,
YASARA View 7.12.5 is available for free and contains all the functions you need to explore a macromolecular structure interactively.
NOC 3.01 a free program for protein structure model-building, visualization, validation and analysis ...
3DNA 1.5 a versatile package for the analysis, rebuilding, and visualization of three-dimensional nucleic acid structures, based on a standard reference frame
ArgusLab 4.0.1 A molecular modeling, graphics, and drug design program
CueMol 1.1.0.178 a program for the macromolecular structure visualization on the Windows platform
MOLDA 6.5 r2 a molecular-model building program
jimp 2 0.091 a free program for visualizing and manipulating molecules.
SweetMollyGrace 1.2 a suite of freeware and shareware tools for automating work of rendering and animating molecules
Facio 10.5.1 3D-Graphics program for Molecular Modeling and Visualization of Quantum Chemical Calculations
VEGA ZZ 2.1.0 It's the evolution of the well known VEGA OpenGL package and includes several new features and enhancements making your research jobs very easy.
GDIS 0.773 a GTK based program for the display and manipulation of isolated molecules and periodic systems
PDBlib 2.2 an extensible object oriented class library, written in C++ for representing the 3-dimensional structure of biological macromolecules.
QuteMol 0.4.1 open source (GPL), interactive, high quality molecular visualization system
AGM View 1.0.3 beta
AGM Build 1.0.3 beta
programs for molecular modeling
BALLView 1.2 standalone molecular modeling and visualization application

 

 

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