Add Favorite Contact us Chinese Version Bioinformatics Software Blog  
Home Page Search Inside About Us  

 

 

Bio-Soft.Net>>>>Protein Analysis >>>>InterViewer 4.0

InterViewer 4.0

   

Size: 760KB
Language: English
Directory: Protein Analysis
Requirements: Windows
Date added: 2014-03-28
Web Site: Home Page

Details

 

Protein-protein interaction networks often consist of thousands of nodes or more, which severely limit the usefulness of many graph drawing tools because they become too slow for interactive anal- ysis of the networks and because they produce cluttered drawings with many edge crossings. We present a new, extremely fast layout algorithm and its implementation called InterViewer3 for visualizing large-scale protein interaction networks. InterViewer3 (1) first finds a layout of connected components of an entire network, (2) finds a global layout of nodes with respect to pivot nodes within a connected component, and (3) refines the local layout of each connected component by first relocating midnodes with respect to their cutvertices and direct neighbors of the cutvertices and then by relocating all nodes with respect to their neighbors within distance 2. Advantages of InterViewer3 over classical graph drawing methods include: (1) it is an order of magnitude faster, (2) it can directly visualize data from protein interaction databases, and (3) it provides several operations for effectively exploring large-scale protein interaction networks.

 

Download Link

Click Here

(If you want to get all of the softwares in this site, PLEASE CLICK HERE)

 

 

 

3D Molecular Modeling
DNA Sequence Analysis
RNA Analysis
Protein Analysis
Education
Biochemical Engineering
PCR
Sequence Format Conversion Utilities
Phylogenetic Analysis
Plasmid Map
Image Analysis
Sequence Alignment & Analysis
Bio-Chip
Miscellaneous
Chemical Drawing Tools
Intresting Stuff
Graphics & Animations
Bio Video
PPT & Classware
Bio Database
Online Tools

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Copyright (C) 1999-2022

Webmaster:biosoftcn@gmail.com(Tan Jie)